Publications


Under Review

  1. Vishal Midya#, Manasi Agrawal#, Leonid Tarassishin, Libni A. Torres-Olascoaga, Joseph Eggers, Chris Gennings, Robert O. Wright, Manish Arora, Martha Maria Téllez-Rojo, Mellissa Picker, Inga Peter, Jeremiah J. Faith, Jean-Frederic Colombe, Shoshannah Eggers. Prenatal metal exposures and childhood gut microbial signatures are associated with elevated fecal calprotectin, under review.#equal contribution

  2. Vishal Midya#, Kiran Nagdeo#, Chris Gennings, Jamil M. Lane, Libni A. Torres-Olascoaga, Megan K. Horton, Martha Maria Téllez-Rojo, Robert O. Wright, Manish Arora, Shoshannah Eggers. Akkermansia muciniphila modifies the association between prenatal metal exposure and depressive symptoms in late childhood, under review.#equal contribution



Peer-reviewed Publications

2024

  1. Jessica Yingst, Vishal Midya, Augustus White, Jonathan Foulds, Caroline O. Cobb, Susan Veldheer, Miao-Shan Yen, and Thomas Eissenberg. Effects of liquid nicotine concentration and flavour on the acceptability of electronic nicotine delivery systems (ENDS) among people who smoke participating in a randomised controlled trial to reduce cigarette consumption, Tobacco Control, April 2024 (In Press)

  2. A.A. Akinkugbe, Vishal Midya, J. Duffy, J. Landero, R.O. Wright, R.J. Wright. Metal mixtures and oral health among children and adolescents in the National Health and Nutrition Examination Survey (NHANES), 2017–2020, International Journal of Hygiene and Environmental Health, p. 114335; Volume 257, April 2024

  3. Jamil M Lane, Francheska M Merced-Nieves, Vishal Midya, Shelley H Liu, Sandra Martinez-Medina, Rosalind J Wright, Martha M Téllez-Rojo, Robert O Wright. Prenatal exposure to metal mixtures and childhood temporal processing in the PROGRESS Birth Cohort Study: Modification by childhood obesity, Science of The Total Environment, p. 170576; January 2024. Volume 917, 20 March 2024

  4. Vishal Midya, Kiran Nagdeo, Jamil M. Lane, Libni A. Torres-Olascoaga, Mariana Torres-Calapiz, Chris Gennings, Megan K. Horton, Martha Maria Téllez-Rojo, Robert O. Wright, Manish Arora, Shoshannah Eggers. Prenatal metal exposures and childhood gut microbial signatures are associated with depression score in late childhood, Science of The Total Environment, January 2024. p.170361; Volume 916, 15 March 2024

2023

  1. Vishal Midya#, Manasi Agrawal#, Amith Maroli, Jared Magee, Lauren Petrick, Jean-Frederic Colombel on behalf of PREDICTS collaborators. Per- and poly-fluoroalkyl substances (PFAS) exposure is associated with later occurrence of inflammatory bowel disease, Clinical Gastroenterology and Hepatology, #equal contribution, December 2023. (in press)

  2. Vishal Midya and Chris Gennings. Detecting Shape-based Interactions among Environmental Chemicals using an Ensemble of Exposure-Mixture Regression and Interpretable Machine Learning Tools, Statistics in Bioscience, November 2023.

  3. Vishal Midya, Jamil M. Lane, Chris Gennings, Libni A. Torres-Olascoaga, Robert O. Wright, Manish Arora, Martha Maria Téllez-Rojo, Shoshannah Eggers. Prenatal Pb exposure is associated with reduced abundance of beneficial gut microbial cliques in late childhood: an investigation using Microbial Co-occurrence Analysis (MiCA), Environmental Science & Technology, October 2023. 57(44):16800-16810. doi: 10.1021/acs.est.3c04346.

  4. Sandra India-Aldana, Meizhen Yao, Vishal Midya, Elena Colicino, Leda Chatzi, Jaime Chu, Chris Gennings, Dean P. Jones, Ruth J. F. Loos, Veronica W. Setiawan, Mathew Ryan Smith, Ryan W. Walker, Dinesh Barupal, Douglas I. Walker & Damaskini Valvi. PFAS Exposures and the Human Metabolome: A Systematic Review of Epidemiological Studies, Current Pollution Reports, September 2023. 9(3):510-568. doi: 10.1007/s40726-023-00269-4.

  5. Vishal Midya#, Cecilia Sara Alcala#, Elza Rechtman, Jill K. Gregory, Kurunthachalam Kannan, Irva Hertz-Picciotto, Susan L. Teitelbaum, Chris Gennings, Maria J. Rosa, and Damaskini Valvi. Machine Learning Assisted Discovery of Interactions between Pesticides, Phthalates, Phenols, and Trace Elements in Child Neurodevelopment, Environmental Science & Technology, August 2023. 57(46):18139–50. doi: 10.1021/acs.est.3c00848. #equal contribution

  6. Morris Alexander Aguilar, Shauna Ebanks, Havell Markus, Mechelle Lewis, Vishal Midya, Kent Vrana, Xuemei Huang, Molly Ann Hall, Yuka Imamura Neuronally Enriched Microvesicle RNAs Are Differentially Expressed in the Serums of Parkinson’s Patients, Frontiers in Neuroscience, July 2023. 17:1145923. doi: 10.3389/fnins.2023.1145923.

  7. Shoshannah Eggers, Vishal Midya, Moira Bixby, Chris Gennings, Libni A Torres-Olascoaga, Ryan W Walker, Robert O Wright, Manish Arora and Martha Maria Tellez Rojo Prenatal Lead Exposure is Negatively Associated with the Gut Microbiome in Childhood, Frontiers in Microbiology, June 2023, Sec. Microorganisms in Vertebrate Digestive Systems, Volume 14 - 2023.

  8. Madeline Keyes, Chloe Andrews, Vishal Midya, Paula Carrasco, Mònica Guxens, Alba Jimeno-Romero, Mario Murcia, Cristina Rodriguez-Dehli, Dora Romaguera, Loreto Santa-Maria, Marina Vafeiadi, Lida Chatzi, Emily Oken, Martine Vrijheid, Damaskini Valvi, Sarbattama Sen, Mediators of the association between maternal body mass index and breastfeeding duration in 3 international cohorts, The American Journal of Clinical Nutrition, ISSN: 0002-9165, Vol: 118, Issue: 1, Page: 255-263.

  9. Tania P Chen, Meizhen Yao, Vishal Midya, Betty Kolod, Rabeea F Khan, Adeyemi Oduwole, Bernard Camins, I Michael Leitman, Ismail Nabeel, Kristin Oliver, Damaskini Valvi, Symptoms Predicting SARS-CoV-2 Test Results in Resident Physicians and Fellows in New York City, COVID, 2023; 3(5):671-681.

  10. Nathan J. Cohen, Meizhen Yao, Vishal Midya, Sandra India-Aldana, Tomer Mouzica, Syam S. Andra, Srinivasan Narasimhan, Anil K. Meher, Manish Arora, Jerry Kok Yen Chan, Shiao-Yng Chan, See Ling Loy, Lidia Minguez-Alarcon, Youssef Oulhote, Jonathan Huang, Damaskini Valvi, Exposure to perfluoroalkyl substances and women’s fertility outcomes in a Singaporean population-based preconception cohort, Science of The Total Environment, 2023 Vol. 873.

  11. Kirtan Kaur, Corina Lesseur, Lixian Chen, Syam S. Andra, Srinivasan Narasimhan, Divya Pulivarthi, Vishal Midya, Yula Ma, Erona Ibroci, Frederieke Gigase, Molly Lieber, Whitney Lieb, Teresa Janevic, Lotje D. De Witte, Veerle Bergink, Anna-Sophie Rommel, Jia Chen, Cross-sectional associations of maternal PFAS exposure on SARS-CoV-2 IgG antibody levels during pregnancy, Environmental Research, 2023 Vol. 219 Pages 115067.



2022

  1. Sailendra N. Nichenametla, Dwight A. L. Mattocks, Diana Cooke, Vishal Midya, Virginia L. Malloy, Wilfredo Mansilla, Bente Øvrebø, Cheryl Turner, Nasser E. Bastani, Jitka Sokolová, Markéta Pavlíková, John P. Richie Jr., Anna K. Shoveller, Helga Refsum, Thomas Olsen, Kathrine J. Vinknes, Viktor Kožich, Gene P. Ables. (2022). Cysteine restriction-specific effects of sulfur amino acid restriction on lipid metabolism, Aging Cell, 00, e13739.

  2. Vishal Midya, Jiangang Liao, Chris Gennings, Elena Colicino, Susan L. Teitelbaum, Robert O. Wright, and Damaskini Valvi. 2022. Quantifying the Effect Size of Exposure-Outcome Association Using δ-Score: Application to Environmental Chemical Mixture Studies, Symmetry, 14, no. 10: 1962.

  3. Léa Maitre, Jean-Baptiste Guimbaud, Charline Warembourg, Nuria Güil-Oumrait, Paula Marcela Petrone, Marc Chadeau-Hyam, Martine Vrijheid, Xavier Basagaña, Juan R. Gonzalez, The Exposome Data Challenge Participant Consortium* (Vishal Midya), State-of-the-art methods for exposure-health studies: Results from the exposome data challenge event, Environment International, Volume 168, 2022, 107422, ISSN 0160-4120. *as a part of the consortium

  4. Vishal Midya, Elena Colicino, David V Conti, Kiros Berhane, Erika Garcia, Nikos Stratakis, Sandra Andrusaityte, Xavier Basagaña, Maribel Casas, Serena Fossati, Regina Gražuleviciene, Line Småstuen Haug, Barbara Heude, Léa Maitre, Rosemary McEachan, Eleni Papadopoulou, Theano Roumeliotaki, Claire Philippat, Cathrine Thomsen, Jose Urquiza, Marina Vafeiadi, Nerea Varo, Miriam B Vos, John Wright, Rob McConnell, Martine Vrijheid, Lida Chatzi, Damaskini Valvi, Association of Prenatal Exposure to Endocrine-Disrupting Chemicals With Liver Injury in Children, JAMA Network Open. 2022;5(7):e2220176.



2021

  1. Vishal Midya and J.G. Liao, Systematic Bias in Mean of Log Bayes Factor: Implication and Application, Communications in Statistics - Theory and Methods, 2021, 1–10.

  2. Andréa L. Hobkirk, Vishal Midya, Nicolle M. Krebs, Sophia I. Allen, Lisa Reinhart, Dongxiao Sun, Andrea L. Stennett, Joshua E. Muscat, Characterizing nicotine exposure among a community sample of non-daily smokers in the United States, BMC Public Health, vol. 21, no. 1, 1025, 2021.

  3. Pritish Mondal, Vishal Midya, Arshjot Khokhar, Shyama Sathianathan, Erick Forno, Predictors of Diffusing Capacity in Children With Sickle Cell Disease: A Longitudinal Study, Frontiers in Pediatrics - Pediatric Pulmonology, 2021; 9:678174.

  4. Pawloski, Kate R., Betty Kolod, Rabeea F. Khan, Vishal Midya, Tania Chen, Adeyemi Oduwole, Bernard Camins, Elena Colicino, I. Michael Leitman, Ismail Nabeel, Kristin Oliver, Damaskini Valvi, Factors Associated with SARS-CoV-2 Infection in Physician Trainees in New York City during the First COVID-19 Wave, International Journal of Environmental Research and Public Health, 18, no. 10: 5274, 2021.

  5. Vishal Midya A Novel LASSO type Bayesian Weighted Quantile Sum Regression for highly correlated multi-group mixture analysis: current context, importance and future directions, ISGlobal: Instituto de Salud Global de Barcelona, April 2021.

  6. Chaitra Rao, Sumathi T. A., Rashi Midha, Geet Oberoi, Bhoomika Kar, Masarrat Khan, Kshipra Vaidya, Vishal Midya, Nitya Raman, Mona Gajre, Nandini Chatterjee Singh, Development and Standardization of the DALI-iLAB (Dyslexia Assessment for Languages of India – Language Assessment Battery, Annals of Dyslexia, , 71, 439–457, 2021.

  7. Brian Vells, Vishal Midya , Amit Prasad Experiences of Burnout Among Nurse Anesthetists, OJIN: The Online Journal of Issues in Nursing, Vol. 26, No. 2, 2021.

  8. Sailendra N Nichenametla, Dwight AL Mattocks, Vishal Midya, Jelena Shneyder, Differential effects of sulfur amino acid-restricted and low-calorie diets on gut microbial profile and bile acid composition in male C57BL6/J mice , Journal of Gerontology: Biological Sciences, , Volume 76, Issue 11, November 2021, Pages 1922–1929.

  9. Kishore Punnath; Kiran K. Dayanand; Vishal Midya, Valleesha N. Chandrashekar, Rajeshwara N. Achur, Srinivas B. Kakkilaya, Susanta K. Ghosh, Suchetha N. Kumari, D. Channe Gowda, Acquired antibody responses against merozoite surface protein-119 antigen during Plasmodium falciparum and P.vivax infections in South Indian city of Mangaluru , Journal of Parasitic Diseases, 45(1), 176–190, 2021.

  10. J.G.Liao, Vishal Midya , Arthur Berg, Connecting and contrasting the Bayes factor and a modified ROPE procedure for testing interval null hypotheses,The American Statistician, 75:3, 256-264, 2021.



2020

  1. Darya S. Nesterova, Vishal Midya, Brad E. Zacharia, Elizabeth A Proctor, Sang Y Lee, Lindsay C Stetson, Justin D Lathia, Joshua B Rubin, Kristin A Waite, Michael E Berens, Jill S Barnholtz-Sloan, James R Connor Sexually Dimorphic Impact of the Homeostatic Iron Regulatory gene, HFE, on survival in Glioblastoma, Neuro-Oncology Advances, Volume 2, Issue 1, January-December 2020, vdaa001.

  2. Vishal Midya^, Dan McGuire^, Renan Sauteraud^, Window Based Feature Extraction Method using XGBoost for Time Series Classification of Solar Flares, 2019 IEEE International Conference on Big Data (Big Data), 2019, pp. 5836-5843, ^Equal contribution

  3. Kishore Punnath, Kiran K. Dayanand, Valleesha N. Chandrashekar, Rajeshwara N. Achur, Srinivas B. Kakkilaya, Susanta K. Ghosh, Benudhar Mukhi, Vishal Midya, Suchetha N. Kumari and D. Channe Gowda, Clinical features and haematological parameters among malaria patients in Mangaluru city area in the southwestern coastal region of India, Parasitology Research, 119, pages 1043–1056, 2020.



2019

  1. Vishal Midya^, Jeffrey Valla^, Hymavathy Balasubramanian, Avantika Mathur, Nandini Chatterjee Singh Cultural differences in the use of acoustic cues for musical emotion experience, PLoS ONE, 14(9): e0222380. ^Equal contribution

  2. Arshjot Khokar, Athira Nair, Vishal Midya, Ashutosh Kumar, Ankita Sinharoy, Tariq Ali Ahmad, Mutasim Abu-Hasan, Pritish Mondal, The Association between Pulmonary Function and Left Ventricular Volume and Function in Duchenne Muscular Dystrophy, Muscle and Nerve, 60: 286-291.

  3. Pritish Mondal, Alison Yirinec, Vishal Midya, Binu-John Sankoorikal, Gayle Smink, Arshjot Khokhar, Mutasim Abu-Hasan, Rebecca Bascom, Diagnostic value of spirometry vs. impulse oscillometry: A comparative study in children with sickle cell disease, Pediatric Pulmonology. 2019; 54: 1422- 1430.

  4. Susan Veldheer, Jessica Yingst, Vishal Midya, Breianna Hummer, Courtney Lester, Nicolle Krebs, Shari Hrabovsky, Ashley Wilhelm, Jason Liao, Miao-Shan Yen, Caroline Cobb, Thomas Eissenberg, Jonathan Foulds, Pulmonary and Other Health Effects of Electronic Cigarette Use Among Adult Smokers Participating in a Randomized Controlled Smoking Reduction Trial, Addictive Behaviours, Volume 91, 2019, Pages 95-101, ISSN 0306-4603.

  5. Shari Hrabovsky, Vishal Midya, Courtney Lester, Susan Veldheer, Jessica M. Yingst, Sophia I. Allen, Nicolle M. Krebs, Jason Liao, Lisa Reinhart, Jennifer Modesto, A. Eden Evins, John P. Richie Jr., Joshua E. Muscat, Kimberly Horn, Jonathan Foulds, The Effect of Usual Brand Cigarette Rod Length on Exposure Levels and Favorability Ratings among Smokers Switching to Normal Nicotine Content SPECTRUM Cigarettes, American Journal of Health Behaviour, Volume 43, Number 2, March 2019, pp. 380-392(13).



2018

  1. Vishal Midya, Sekhar Pal, Ankita Sinharoy, Jishu K. Das, Harish Rao, Mutasim Abu-Hasan, Pritish Mondal, The Association Between Female Smoking and Childhood Asthma Prevalence–A Study Based on Aggregative Data, Frontiers in Public Health, 6:295, 2018.

  2. Susan Veldheer, Vishal Midya, Courtney Lester, J.G. Liao, Jessica Yingst, Shari Hrabovsky, Sophia I Allen, Nicolle M Krebs, Lisa Reinhart, A Eden Evins, Kimberly Horn, John Richie, Joshua Muscat, Jonathan Foulds, Acceptability of Switching from Usual Brand to SPECTRUM Research Cigarettes with Usual Nicotine Content, Tobacco Regulatory Science, 2018;4(1):573-585.



2016

  1. Anirban Patranabis, Kaushik Banerjee, Vishal Midya, Shankha Sanyal, Archi Banerjee, Ranjan Sengupta, Dipak Ghosh. Categorization of Tablas by Wavelet Analysis, preprint available at arXiv.


2015

  1. Chaitra Rao, Rashi Midha, Vishal Midya et al., Dyslexia Assessment for Languages of India (DALI) & Screening Tool for Teachers and Assessment Tools for Psychologists. National Brain Research Centre and Department of Science and Technology, India, October 2015

  2. Anirban Patranabis, Kaushik Banerjee, Vishal Midya, Sneha Chakraborty, Shankha Sanyal, Archi Banerjee, Ranjan Sengupta, Dipak Ghosh. Harmonic and timbre analysis of tabla strokes, preprint available at arXiv.

  3. Vishal Midya. On Mathematical Functions for Theoretical and Experimental Distributions for Shrutis (Micro Tonal Intervals) and Their Application in Hindustani Music, preprint available at arXiv.